Category Archives: DNA repair

DNA cleavage by type II and IA topoisomerases

Brian Schmidt and colleagues presented a “novel and unified two-metal mechanism for DNA cleavage by type II and IA topoisomerases” on Nature 465: 641–644 (03 June 2010). Below is part of the abstract: “Here we present the structure of the … Continue reading

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Filed under DNA, DNA damage, DNA repair, s. cerevisiae, saccharomyces cerevisiae, structural biology, topoisomerase

structural and biophysical studies of PARP-1

There was an article on the Journal of Molecular Biology (Issue 5, Volume 395, 5 February 2010, pages 983-994) which presented structural and biophysical information about the human PARP-1 protein. PARP-1, or poly(ADP-ribose) polymerase-1 is an enzyme that monitors DNA … Continue reading

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Filed under biophysics, DNA, DNA damage, DNA repair, DNA-binding protein

exponential relationship between DNA-end binding activity and maximum longevity

In a recent study published in the journal Mechanisms of Ageing and Development, Antonello Lorenzini and colleagues observed a novel relationship between the capacity of nuclear proteins to bind DNA ends and the longevity of mammalian species. This activity increases … Continue reading

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Filed under ageing, aging, DNA, DNA damage, DNA repair, DNA-binding protein, double strand break, DSB, lifespan, long-lived species, longevity, replicative lifespan

BLAP75/Rmi1

Liudmila Chelysheva and colleagues studied BLAP75/Rmi1 in relation to BLM/Sgs1 and TopoIIIα/Top3. Their paper appeared on the December 2008 issue of PLoS Genetics journal. Below is the summary: “Recombination is a process by which cells can repair DNA damage. Such … Continue reading

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Filed under DNA damage, DNA repair, genetics, genome stability

DSB DNA repair genotype predictive of later mortality

A number of pathways operate to repair DNA damage: nucleotide excision repair (NER), base excision repair (BER), double-strand breaks (DSB), and mismatch repair (MMR). In a study by David Neasham and colleagues, single nucleotide polymorphisms in 16 DNA repair genes … Continue reading

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Filed under cancer, DNA, DNA damage, DNA repair, double strand break, dying, gene, genetics, life sciences, mortality, research, science

ATR and H2AX

Last month (December 2008)  in the Journal of Biological Chemistry, Rebecca Chanoux and colleagues reported the results of their studies on ATR and H2AX. They wrote: “If ATR prevents the collapse of stalled replication forks into DSBs, and H2AX facilitates … Continue reading

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Filed under ATR, biochemistry, DNA, DNA damage, DNA repair, double strand break, genetics, genome stability, H2A.X, homologous recombination, recombination

WRN and MUS81

There is a Journal of Cell Biology paper by Annapaola Franchitto and colleagues entitled: Replication fork stalling in WRN-deficient cells is overcome by prompt activation of a MUS81-dependent pathway Below is tha abstract: Failure to stabilize and properly process stalled … Continue reading

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Filed under ageing, biogerontology, cell biology, DNA, DNA damage, DNA repair, double strand break, endonuclease, genetics, recombination, replication, Werner Syndrome, Werners Syndrome

WRN protects against cytotoxicity of topotecan but not etoposide

Markus Christmann and colleagues recently reported their findings on whether DNA helicases, like WRN, are involved in the repair of topoisomerase inhibitor-induced DNA damage. “[24] M. Poot, K.A. Gollahon and P.S. Rabinovitch, Werner syndrome lymphoblastoid cells are sensitive to camptothecin-induced … Continue reading

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Filed under ageing, DNA repair, WRN

human exonuclease 1 and BLM helicase

In a recent paper by Amitabh Nimonkar and colleagues, it was established that human BLM helicase, a member of the RecQ family, stimulates human exonuclease 1 (hExo1), a 5′ – 3′ double-stranded DNA exonuclease … “Stimulation of DNA resection by … Continue reading

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Filed under biochemistry, biology, DNA, DNA repair, double strand break, exonuclease, genetics, helicase, homologous recombination, molecular biology

WRN mini-review

In a recent issue of DNA Repair [7 (2008) 1776–1786], Julia Sidorova reviews the role of WRN in preserving DNA integrity during replication and propose that WRN can function in coordinating replication fork progression with replication stress-induced fork remodeling. She … Continue reading

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Filed under ageing, aging, biological sciences, biology, DNA, DNA repair, double strand break, exonuclease, genetics, helicase, homologous recombination, lifespan, longevity, molecular biology, nucleus, science, Werner Syndrome, Werners Syndrome, WRN